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Muscle Model Explorer PublicOpenWormUnderstand the way the muscle model is built up via NeuroML2 to produce cell membrane dynamics! |
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Earn the pre requisite badgesScreenshot of your badgelist profile with the Hodgkin-Huxley tutorial badge (http://bit.ly/2bJO9VW) and the Muscle Model builder badge (http://bit.ly/2bKjCTw) successfully earned. More Info |
Run explorer codeSuccessfully run the code in the muscle model explorer iPython notebook (http://bit.ly/2c6GO2c). Run in the NeuroML2 directory! Notebook environment not required. Copy the input and output as text, paste at http://gist.github.com and link here. More Info |
Run the figure 2A code & compare to paperOn the command line in the NeuroML2 directory, run: pynml LEMS_Figure2A.xml Find figure 2A in the Boyle & Cohen 2008 paper. (http://bit.ly/2cjXnce) Take a single screenshot with paper and model figures. Arrange the model figure that most closely matches the paper figure next to each other. More Info |
Run the figure 2B code & compare to paperOn the command line in the NeuroML2 directory, run: pynml LEMS_Figure2B.xml Find figure 2B in the Boyle & Cohen 2008 paper. (http://bit.ly/2cjXnce) Take a single screenshot with paper and model figures. Arrange the model figure that most closely matches the paper figure next to each other. More Info |
Explain the figuresIn your own words, explain what the 2A & 2B figures are showing, beyond just the figure titles. Do you see a connection between the last block of the notebook and some of the figures? If so, use your own words to explain. More Info |
Marc Mirandamarc4mir |
Matt CuffaroMatt-Cuffaro |
Mauricio Fonsecamaufonseca |
Neil Shahnshah |
Ramin M. Hasaniramin_m_h |
Shubham Singhshubhsingh594 |
Claus Agerskovcagerskov |
Golol cohanGolol-cohan |
Hugh Osbornehugh-osborne |
Kristian D'Amatokrisdamato |
Max JacksonDeadHorsePinata |
Michael WhealyMichaelW |
Parvathy Neelakandanparvathyn8 |
Sergio Miguel ToméSergioMT |
Siddhant BansalSiddhant-Bansal |
